Publications 2015/Bioengineering and Biosystems

Articles in magazines (2015) / BaB
Title	Author	Source
3D cultivation techniques for primary human hepatocytes	Bachmann, A. / Moll, M. / Gottwald, E. / Nies, C. / Zantl, R. / Wagner, H. / Burkhardt, B. / Martinez, S. J. / Ladurner, R. / Thasler, W. / Damm, G. / Nussler, A.K. (2015)	Microarrays, 4, (1), 64-83, DOI:10.3390/microarrays4010064
A multi-disciplinarily designed mesocosm to address the complex flow-sediment-ecology tripartite relationship on the microscale	Schmidt, H. / Thom, M. / Matthies, K. / Behrens, S. / Obst, U. / Wieprecht, S. / Gerbersdorf, S., U. (2015)	Environmental Sciences Europe (2015), 27, 2, 1-11, DOI 10.1186/s12302-014-0037-y
Tackling antibiotic resistance: the environmental framework	Berendonk, T. / Manaia, C. / Merlin, C. / Fatta-Kassinos,D. / Cytryn, E. / Walsh, F. / Bürgmann, H. / Sørum, H. / Norström, M. / Pons, M.-N. / Kreuzinger, N. / Huovinen, P. / Stefani, S. / Schwartz, T. / Kisand, V. / Baquero, F. / Martinez, J., L. (2015)	Nature Reviews Microbiology (2015), 13, 310–317 doi:10.1038/nrmicro3439
Effect of dental cements on peri-implant microbial community: comparison of the microbial communities inhabiting the peri-implant tissue when using different luting cements	Korsch, M. / Marten, S., M. / Dötsch, A. / Jáuregui, R. / Pieper, D., H. / Obst, U. (2015)	Clin Oral Implants Res. (2015), 27, 12, e161-e166, doi: 10.1111/clr.12582.
The Pseudomonas aeruginosa Transcriptional Landscape Is Shaped by Environmental Heterogeneity and Genetic Variation	Dötsch, A. / Schniederjans, M. / Khaledi, A. / Hornischer, K. / Schulz, S. / Bielecka, A. / Eckweiler, D. / Pohl, S. / Häussler, S. (2015)	mBio (2015), 6, 4, e00749-15
Wastewater treatment – adsorption of organic micropollutants on activated HTC-carbon derived from sewage sludge	Kirschhöfer, F. / Sahin, O. / Becker, G., C. / Meffert, F. / Nusser, M. / Anderer, G. / Kusche, S. / Klaeusli, T. / Kruse, A. / Brenner-Weiss, G. (2015)	Water Sci Technol. (2015), doi:10.2166/wst.2015.511
Glycolipids produced by Rouxiella sp. DSM 100043 and isolation of the biosurfactants via foam - fractionation	Kügler, J., H. / Muhle‑Goll, C. / Hansen, S., H. / Völp, A., R. / Kirschhöfer, F. / Kühl, B. / Brenner‑Weiss, G. / Luy, B. / Syldatk, C. / Hausmann, R. (2015)	AMB Expr (2015) 5, 1, 82, DOI 10.1186/s13568-015-0167-7
Synergistic effect of membrane active peptides polymyxin B and gramicidin S on multidrug resisitant strains and biofilms of pseudomonas aeruginosa	Berditsch, M. / Jäger, T. / Strempel, N. / Schwartz, T. / Overhage, J. / Ulrich, AS (2015)	Antimicrob Agents Chemother (2015) September 2015, 59, 9, 5288-5296
The absence of the Pseudomonas aeruginosa OprF protein leads to increased biofilm formation through variation in c-di-GMP level	Bouffartigues, E. / Moscoso J. / Duchesne, R. / Rosay, T. / Fito-Boncompte, L. / Gicquel, G. / Maillot, O. / Benard, M. / Bazire, A. / Brenner-Weiß, G. / Lesouhaitier, O. / Lerouge, P. / Dufour, A. / Orange, N / Feuilloley, MGJ. / Overhage, J. / Filloux, AAM / Chevalier, S	Front. Microbiol. (2015), 6, 630, 1-13, doi: 10.3389/fmicb.2015.00630
Potential application of antimicrobial peptides in the treatment of bacterial biofilm infections	Strempel, N. / Strehmel, J. / Overhage, J. (2015)	Curr Pharm Des 21 (2015), 1, 67-84
Morphology, composition and performance of a ceramic filter for household water treatment in Indonesia	Matthies, K. / Bitter, H. / Deobald, N. / Heinle, M. / Diedel, R. / Obst, U. / Brenner-Weiß, G. (2015)	Water Practice and Technology (2015), 10 (2) 361-370
Surface Acustic Wave (SAW) resonators for monitoring conditioning film formation	Hohmann, S. / Kögel, S. / Brunner, Y. / Schmieg, B. / Ewald, C. / Kirschhöfer, F. / Brenner-Weiß, G. / Länge, K. (2015)	Sensors (Basel), 2015 15 (5) 11873-11888
Rational design of a peptide capture agent for CXCL8 based on a model of the CXCL8:CXCR1 complex	Helmer, D. / Rink, I. / Dalton, J.A.R. / Brahm, K. / Joest, M. / Nargang, T.M. / Blum, W. / Wadhani, P. / Brenner-Weiß, G. / Rapp, B.E. / Giraldo, J. / Schmitz, K. (2015)	RSC Advances 2015, 5, 25657-25668
The sensor kinase PA4398 modulates swarming motility and biofilm formation in Pseudomonas aeruginosa PA14	Strehmel, J. / Neidig, A. / Nusser, M. / Geffers, R. / Brenner-Weiß, G. / Overhage, J. (2015)	Applied and Environmental Microbiology (2015), 81 (4) 1274-1285
p53 is active in murine stem cells and alters the transcriptome in a manner that is reminiscent of mutant p53	Yan, H. / Solozobova, V. / Zhang, P. / Armant, O. / Kuehl, B. / Brenner-Weiß, G. / Blattner, C. (2015)	Cell Death Dis. 2015 Feb 26;6:e 1662 doi 10.1038/cddis.2015.33
A dynamic periplasmic electron transfer network enables respiratory flexibility beyond a thermodynamic regulatory regime	Sturm, G. / Richter, K. / Doetsch, A. / Heide, H. / O Louro, R. / Gescher J. (2015)	ISME J advance online publication 2015, 9, 1802-1811, doi:10.1038/ismej.2014.264
Characterization of silane-based hydrophobic admixtures in concrete using TOF-MS	Herb, H. / Gerdes, A. / Brenner-Weiß, G. (2015)	Cement and Concrete Research, 70 (2015), 77-82
Lipase-catalyzed synthesis of glucose-6-O-hexanoate in deep eutectic solvents	Pöhnlein, M. / Ulrich, J. / Kirschhöfer, F. / Nusser, M. / Muhle-Goll, C. / Kannengiesser, B. / Brenner-Weiß, G. / Luy, B. / Liese, A. / Syldatk, C. / Hausmann, R. (2015)	Eur J Lipid Soc Technol. 117 (2015), 161-166
Comparing different reactor configurations for Partial Nitritation/ Anammox at low temperatures	Gilbert, E. / Agrawal, S. / Schwartz, T. / Horn, H. / Lackner, S. (2015)	Water Research 81 (2015), 92–100
Tackling antibiotic resistance: the environmental framework	Berendonk, T. / Manaia, C. / Merlin, C. / Fatta‐Kassinos, D. / Cytryn, E. / Walsh, F. / Bürgmann, H. / Sørum, H. / Norström, M. / Pons, M. / Kreuzinger, N. / Huovinen, P. / Stefani, S. / Schwartz, T ./ Kisand, V. / Baquero, F. / Luis Martinez, J. (2015)	Nature Reviews Microbiology 13 (2015), 310–317
Whole genome and transcriptome analyses of environmental antibiotic sensitive and multi-resistant Pseudomonas aeruginosa isolates exposed to waste water and tap water	Schwartz, T. / Armant, O. / Bretschneider, N. / Hahn, A . / Kirchen, S. / Seifert, M. / Do¨tsch, A. (2014)	Microbial biotechnology 1 (2015), 8, 116-130
Multi-Channel Microfluidic Biosensor Platform Applied for Online Monitoring and Screening of Biofilm Formation and Activity	Bruchmann, J. / Sachsenheimer, K. / Rapp, B. / Schwartz, T. (2014)	PLOS One (2015), 10(2), e117300, doi 10.1371/journal.phone.0117300
Microbiological characterization of aquatic microbiomes targeting taxonomical marker genes and antibiotic resistance genes of opportunistic bacteria	Alexander, J. / Bollmann, A. / Seitz, W. / Schwartz, T. (2015)	Science of the Total Environment (2015), 512-513, 316-325
Optimization of enzyme immobilization on magnetic microparticles using 1-ethyl-3-(3- dimethylaminopropyl)carbodiimide (EDC) as a crosslinking agent	F. Kazenwadel, F. / Wagner, H. / B. E. Rapp, B:, E. / Franzreb, M. (2015)	Analytical Methods, 2015, 7, 10291-10298
Integrated system for temperature-controlled fast protein liquid chromatography. II. Optimized adsorbents and ‘single column continuous operation’	Cao, P. / Müller, T., K., H. / Ketterer, B. / Ewert, S. / Theodosiou, E. / Owen, R., T., T. / Franzreb, M. (2015)	Journal of Chromatographie A, (2015), 1403, 118-131
Low biosorption of PVA coated engineered magnetic nanoparticles in granular sludge assessed by magnetic susceptibility	Herrling, M., P. / Fetsch, K., L. / Delay, M. / Blauert, F. / Wagner, M. / Franzreb, M. / Horn, H. / Lackner, S. (2015)	Science of Total Environment (2015), 537, 43-50
Thermoresponsive Agarose Based Microparticles for Antibody Separation	Ooi, H.W. / Ketterer, B. / Trouillet, V. / Franzreb, M. / Barner-Kollwollik, C. (2015)	Biomacromolecules, (2015), DOI:10.1021/acs.biomac.5b01391
Insights into the Separation Performance of MOFs by High-Performance Liquid Chromatography and In-depth Modelling	Qin, W. / Silvestre, M. , E./ Brenner-Weiss, G. / Wang, Z. / Schmitt, S. / Hübner, J. / Franzreb, M. (2015)	Separation and Purification Technology (2015), 156, Part 2, 249-258, doi:10.1016/j.seppur.2015.10.008
Insights into chromatographic separation using core–shell metal–organic frameworks: Size exclusion and polarity effects	Qin, W. / Silvestre, M., E. / Kirschhöfer, F. / Brenner-Weiss, G. / Franzreb, M. (2015)	Journal of chromatography A (2015), 1411, 77-83
Treatment of Berberine Hydrochloride Pharmaceutical Wastewater by O3/UV/H2O2 Advanced Oxidation Process	Qin, W. / Song, Y. / Dai, Y. / Qiu, G. / Ren, M. / Zeng, P. (2015)	Environmental Earth Science, (2015), 73 , 4939-4946
Light extinction and scattering by agarose based resin beads andapplications in high-throughput screening	Kittelmann, J. / Hämmerling, F. / Ebeler, M. / Hubbuch, J. (2015)	Journal of Chromatographie A , (2015)
Compartmented microfluidic bioreactor system using magnetic enzyme immobilisates for fast small-scale biotransformation studies	Hübner, J. / Brakowski, R. / Wohlgemuth, J. / Brenner-Weiß, G. / Franzreb, M. (2015)	Eng Life Sci. , 2015, 15, 721-726, DOI: 10.1002/elsc.201400171
Synthetic enzyme supercomplexes: co- immobilization of enzyme cascades	Kazenwadel, F / Franzreb, M / and Rapp, B.E.	Analytical Methods, (2015), 7, 4030-4037
Transparent films of metal-organic frameworks for optical applications	Gu, Z. / Pfriem, A. / Hamsch, S. / Breitwieser, H. / Wohlgemuth, J. / Heinke, L. / Gliemann, H. / Wöll, C. (2015)	Microporous and Mesoporous Materials 211 (2015), 82–87
Purification of equine chorionic gonadotropin (eCG) using magnetic ion exchange adsorbents in combination with high-gradient magnetic separation	Müller, C / Heidenreich, E. / Franzreb, M. / Frankenfeld, K. (2007)	Biotechnology progress 31 (2015), 1, 78–89
Controlling the partitioning behavior of magnetic micro-particles via hydrophobization with alkylamines: Tailored adsorbents for continuous bioseparation	Paulus, A. / Till, N. / Franzreb, M. (2015)	Applied Surface Science 332 (2015), 631–639
Magnetic microgels, a promising candidate for enhanced magnetic adsorbent particles in bioseparation: synthesis, physicochemical characterization, and separation performance	Turcu, R. / Socoliuc, V. / Craciunescu, I. / Petran, A. / Paulus, A. / Franzreb, M. / Vasiled, E. / Vekas, L. (2015)	Soft Matter 11 (2015), 5, 1008-1018

Proceedings (2015) / BaB
Title	Author	Source
Magnetic Microparticles@UiO-67 Core-Shell Composites as a Novel Stationary Phase for High Performance Liquid Chromatography	2014 International Conference on Advanced Manufacturing Technology and Materials Engineering (AMTME 2014), October 25-26, Guangzhou, China	Qin, W.W. / Silvestre, M. / Franzreb, M.
Selective Platelet Activation by Surfaces and Soluble Agonists	20th International Conference on Secondary Ion Mass Spectrometry, September 2015, Seattle, WA, USA	Reviakine, I. / Donati, A. / Srivastava, T. / Gupta, S.
Studying Platelet Activation by ToF-SIMS/PCA	20th International Conference on Secondary Ion Mass Spectrometry, September 2015, Seattle, WA, USA	Reviakine, I. / Donati, A. / Srivastava, T. / Gupta, S.
Studying Platelet Activation by Time-of-Flight Secondary Ion Mass Spectrometry (ToF-SIMS)	34th Annual Meeting of the German Society for Clinical Microcirculation and Hemorheology, Regensburg, Germany, November 2015.	Reviakine, I. / Donati, A. / Srivastava, T. / Gupta, S.
Towards Studying Platelet Activation at the Single Cell Level	34th Annual Meeting of the German Society for Clinical Microcirculation and Hemorheology, Regensburg, Germany. November 2015.	Donati, A. / Kustanovich, K. / Jeffries, G. / Jesorka, A. / Reviakine, I.
The significance of material properties for stem cells: how matrix mechanics, nanostructure and 3D architecuter impact hematopoietic stem cells	3rd International Annual Conference of the German Stem Cell Network (GSCN), Frankfurt 09-11/09/2015.	Lee-Thedieck, C.
Biomimetic materials for biophysical regulation of human hematopoietic stem cells	Annual Congress of the German Society for Biomaterials (DGBM). Freiburg. 12-14/11/2015.	Lee-Thedieck, C.
Protein based hydrogels for hematopoietic stem- and progenitor cells	Baden-Württemberg Stiftung Forschungstag, 22. Juli 2015, Stuttgart	Raic, A. / Bodenberger, N. / Rosenau, F. / Lee-Thedieck, C.
Biomimetische, nanostrukturierte Materialien für die Kultivierung hämatopoetischer Stammzellen	BioNanoHSZ. i-Wing, Dresden 27-29/04/2015	Lee-Thedieck, C.
Molekulares Biopatterning technischer Oberflächen und neue Drucktechnologien für innovative Biotransformationssysteme	Biotechnologie 2020 + Jahrestagung 2015, 22.09.-23.09.2015, Berlin	Kazenwadel, F. / Franzreb, M.
Combining Potential-Controlled Liquid Chromatography and CDI Approach to Concentrate Molecules from the White Biotechnology	CDI Konferenz, Oktober 24.-29.2015, Saarbrücken	Biegert, E. / Hümmer, D. /Franzreb, M.
Novel Reactor devices for the Compartmentalized Immobilization of Enzyme Cascades	DECHEMA Biomaterials - made in Bioreactors, 26.-28.05.2015, Radebeul	Kazenwadel, F. / Wohlgemuth, J. / Wagner, H. / Franzreb, M.
Novel Reactor Devices for the Compartmentalized Immobilization of Enzyme Cascades	DECHEMA Biomaterials - made in Bioreactors, Poster, 26.-28.05.2015, Radebeul	Kazenwadel, F. / Wohlgemuth, J. / Wagner, H. / Franzreb, F.
Magnetic microparticles@UiO-67 core-shell composites as a novel stationary phase for high performance liquid chromatography	Fourth International Conference on Multinational, Hybrid and Nanomaterials, 2015 March 9-13, Sitges (near Barcelona), Spain	Qin, W. W. / Silvestre, M. / Franzreb, M.
Cryogenic Engineering Conference	International Cryogenie Materials Conference 2015, June 28 – July 2, Tucson, Arizona	Wohlgemuth, J.
The significance of 3D architecture and perfusion in a biomimetic model of the hematopoietic stem cell niche	International annual conference of the German Stem Cell Network, 2015 September 9-11, Frankfurt, Germany	Rödling, L. / Raic, A. / Hansmann, J. / Bieback, K. / Lee-Thedieck, C.
Poly(ethylene glycol) hydrogel-based biomaterials for hematopoietic stem cells	Invited Lecture. Summer School NanoBioMater. Bad Herrenalb. 22-24/06/2015.	Lee-Thedieck, C.
Designing biomaterials for hematopoietic stem cells	Invited Talk. Euro Intelligent Materials. Kiel. 10-12/06/2015.	Lee-Thedieck, C.
Stem Cell–Material-Interactions	Invited lecture at the Fürst Stirum Hospital Bruchsal, Gynacology. Bruchsal. 25/03/2015	Lee-Thedieck, C.
The significance of material properties for stem cells: on the role of substrate mechanics, nanostructure and 3D architecture in the hematopoietic stem cell niche	Invited lecture at the institute seminar of the NMI (The Natural and Medical Sciences Institute at the University of Tübingen). Reutlingen. 14/12/2015	Lee-Thedieck, C.
Molekulares Biopatterning technischer Oberflächen und neue Drucktechnologien für innovative Biotransformationssysteme	MIE Molecular Interaction Engineering (MIE) Projekttreffen, 23.11. -24.11.2015, KIT Campus Nord	Kazenwadel, F. / Franzreb, M.
Microfabrication of an artificial multifunctional hematopoietic stem cell niche	Statusworkshop des Kompetenznetzes Funktionelle Nanostrukturen, BioMAT-S & CleanTech, 2015 October 1-2, Bad Herrenalb, Germany	Winkler, A. / von Wulffen, J. / Lee-Thedieck, C.
Macroporous protein based cryogels for hematopoietic stem- and progenitor cells	Statusworkshop des Kompetenznetzes Funktionelle Nanostrukturen, BioMAT-S & CleanTech., 30.9.-2.10.2015, Bad Herrenalb	Raic, A. / Bodenberger, N. / Rosenau, F. / Lee-Thedieck, C.
The potential of macroporous hydrogels as biomimetic 3D bone marrow analogs	TEDD annual meeting. Moving 3D cultures from bench to bedside. Wädenswil, Switzerland. 22/10/2015	Lee-Thedieck. C.
Towards Studying Platelet Activation at the Single Cell Level	Technology meets Biology meeting of the Nordic Network for Biomembrane Dynamics. Tallinn, Estonia 10.2015	Donati, A. / Kustanovich, K. / Jeffries, G. / Jesorka, A. / Reviakine, A.
Bioinspired cryogels as an artifical bone marrow analog for expansion of hematopoietic stem cells	World Conference on Regenerative Medicine, 21.10.-23.10.2015, Leipzig	Raic, A. / Bodenberger, N. / Rosenau, F. / Lee-Thedieck, C.

Article in books (2015) MNTG
Title	Author	Source
DSP of Biomolecules in Encyclopedia of Applied Electrochemistry	Holtmann, D. / Franzreb, M.	ISBN 1-4419-6997-7
Impacts of advanced oxidation processes on microbioms during wastewater treatment	Alexander, J., Karaolia, P., Fatta-Kassinos, D., Schwartz, T. (2015)	The Handbook of Environmental Chemistry, Springer Verlag
RiSKWa-Statuspapier	Martin Exner und Thomas Schwartz	Dechema